Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein ygl010w | SAMN04488090_2322 | Not Available | Negative | 2948440 - 2948907 | 17946.5 |
| dna primase | SAMN04488090_2323 | Not Available | Negative | 2949004 - 2951025 | 76761.7 |
| mannose-6-phosphate isomerase, type 2 | SAMN04488090_2324 | Not Available | Positive | 2951204 - 2951722 | 19491.9 |
| anti-sigma-k factor rska | SAMN04488090_2325 | Not Available | Negative | 2951842 - 2952675 | 30123.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_2326 | Not Available | Negative | 2952687 - 2953268 | 22364.9 |
| protein of unknown function | SAMN04488090_2327 | Not Available | Negative | 2953883 - 2954329 | 15781.0 |
| pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (e1) component | SAMN04488090_2328 | Not Available | Positive | 2954653 - 2957115 | 91961.2 |
| hypothetical protein | SAMN04488090_2329 | Not Available | Positive | 2957155 - 2958333 | 44341.6 |
| hypothetical protein | SAMN04488090_2330 | Not Available | Negative | 2958314 - 2959684 | 51411.9 |
| hypothetical protein | SAMN04488090_2331 | Not Available | Negative | 2959681 - 2959833 | 5396.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
