Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypepd_reg-like domain-containing protein | SAMN04488090_2312 | Not Available | Negative | 2936120 - 2937301 | 45140.4 |
| amidophosphoribosyltransferase | SAMN04488090_2313 | Not Available | Negative | 2937400 - 2939310 | 72990.1 |
| nadh dehydrogenase subunit n | SAMN04488090_2314 | Not Available | Negative | 2939618 - 2941066 | 52597.4 |
| nadh dehydrogenase subunit m | SAMN04488090_2315 | Not Available | Negative | 2941078 - 2942733 | 60611.3 |
| nadh dehydrogenase subunit l | SAMN04488090_2316 | Not Available | Negative | 2942744 - 2944588 | 66932.9 |
| uncharacterized domain 1-containing protein | SAMN04488090_2317 | Not Available | Positive | 2944763 - 2945317 | 20250.7 |
| protein of unknown function | SAMN04488090_2318 | Not Available | Positive | 2945362 - 2945904 | 20148.1 |
| nadh dehydrogenase subunit k | SAMN04488090_2319 | Not Available | Negative | 2945905 - 2946213 | 11187.2 |
| nadh dehydrogenase subunit j | SAMN04488090_2320 | Not Available | Negative | 2946210 - 2946743 | 19295.2 |
| formate hydrogenlyase subunit 6/nadh:ubiquinone oxidoreductase subunit (chain i) | SAMN04488090_2321 | Not Available | Negative | 2947193 - 2948394 | 44429.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
