Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04488090_2302 | Not Available | Positive | 2927046 - 2927687 | 24353.4 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN04488090_2303 | Not Available | Negative | 2927785 - 2928324 | 20540.3 |
| ost-hth/lotus domain-containing protein | SAMN04488090_2304 | Not Available | Negative | 2928522 - 2929328 | 30283.3 |
| protein of unknown function | SAMN04488090_2305 | Not Available | Positive | 2929482 - 2930408 | 33312.5 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN04488090_2306 | Not Available | Positive | 2930502 - 2931011 | 17849.4 |
| two component transcriptional regulator, lyttr family | SAMN04488090_2307 | Not Available | Negative | 2930993 - 2931643 | 24886.2 |
| histidine kinase | SAMN04488090_2308 | Not Available | Negative | 2931640 - 2933130 | 57865.2 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04488090_2309 | Not Available | Negative | 2933302 - 2934342 | 37026.5 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04488090_2310 | Not Available | Negative | 2934339 - 2935106 | 28348.0 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04488090_2311 | Not Available | Negative | 2935111 - 2935908 | 28936.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
