Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0220 | Not Available | Negative | 291043 - 291912 | 32938.9 |
| hypothetical protein | SAMN04488090_0221 | Not Available | Negative | 291919 - 292746 | 31449.0 |
| right handed beta helix region | SAMN04488090_0222 | Not Available | Positive | 292970 - 294778 | 67183.1 |
| superfamily ii dna or rna helicase, snf2 family | SAMN04488090_0223 | Not Available | Positive | 294818 - 298156 | 128171.0 |
| nitrilase | SAMN04488090_0224 | Not Available | Positive | 298217 - 299140 | 34279.8 |
| hypothetical protein | SAMN04488090_0225 | Not Available | Positive | 299252 - 299593 | 12670.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488090_0226 | Not Available | Positive | 299737 - 302076 | 86732.5 |
| pepsy-associated tm region | SAMN04488090_0227 | Not Available | Positive | 302076 - 303653 | 59472.9 |
| mg2+-importing atpase | SAMN04488090_0228 | Not Available | Negative | 303692 - 306199 | 90852.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0229 | Not Available | Negative | 306355 - 307809 | 52224.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
