Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488090_2291 | Not Available | Positive | 2913516 - 2914835 | 49556.2 |
| arac-type dna-binding protein | SAMN04488090_2293 | Not Available | Negative | 2916016 - 2916855 | 33342.4 |
| thiosulfate dehydrogenase | SAMN04488090_2294 | Not Available | Positive | 2916943 - 2917347 | 14784.8 |
| polysaccharide deacetylase | SAMN04488090_2295 | Not Available | Positive | 2917415 - 2918302 | 33332.8 |
| hexosaminidase | SAMN04488090_2296 | Not Available | Negative | 2918396 - 2920678 | 84224.9 |
| transcriptional regulator, arac family | SAMN04488090_2297 | Not Available | Positive | 2920752 - 2921879 | 43044.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_2298 | Not Available | Positive | 2921925 - 2923274 | 50072.7 |
| hypothetical protein | SAMN04488090_2299 | Not Available | Positive | 2923354 - 2924532 | 41717.4 |
| cytidylate kinase | SAMN04488090_2300 | Not Available | Negative | 2924601 - 2925293 | 26191.4 |
| adenine deaminase | SAMN04488090_2301 | Not Available | Positive | 2925403 - 2927046 | 59068.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
