Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2281 | Not Available | Positive | 2894524 - 2895660 | 41905.3 |
| flgd ig-like domain-containing protein | SAMN04488090_2282 | Not Available | Positive | 2895670 - 2900610 | 180090.0 |
| nucleotide-binding universal stress protein, uspa family | SAMN04488090_2283 | Not Available | Negative | 2900729 - 2901562 | 30899.8 |
| glutaminyl-trna synthetase | SAMN04488090_2284 | Not Available | Positive | 2901737 - 2903413 | 63887.5 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04488090_2285 | Not Available | Negative | 2903672 - 2904514 | 31500.9 |
| potassium/proton antiporter, cpa1 family | SAMN04488090_2286 | Not Available | Negative | 2904716 - 2905927 | 43339.3 |
| component of the tol biopolymer transport system | SAMN04488090_2287 | Not Available | Negative | 2906037 - 2909279 | 121452.0 |
| glycine/d-amino acid oxidase | SAMN04488090_2288 | Not Available | Negative | 2909328 - 2910407 | 40693.4 |
| hypothetical protein | SAMN04488090_2289 | Not Available | Negative | 2910497 - 2911522 | 38493.2 |
| patatin-like phospholipase | SAMN04488090_2290 | Not Available | Positive | 2911616 - 2913385 | 65242.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
