Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase complex protein llde | SAMN04488090_2271 | Not Available | Positive | 2882619 - 2883353 | 27198.6 |
| hypothetical protein | SAMN04488090_2272 | Not Available | Negative | 2883489 - 2883869 | 13980.6 |
| l-lactate dehydrogenase complex protein lldf | SAMN04488090_2273 | Not Available | Positive | 2884432 - 2885811 | 51492.5 |
| l-lactate dehydrogenase complex protein lldg | SAMN04488090_2274 | Not Available | Positive | 2885808 - 2886404 | 21314.8 |
| surface antigen variable number repeat-containing protein | SAMN04488090_2275 | Not Available | Negative | 2886522 - 2887913 | 54959.4 |
| protein of unknown function | SAMN04488090_2276 | Not Available | Negative | 2888282 - 2888797 | 19344.0 |
| nad(p)h-hydrate epimerase | SAMN04488090_2277 | Not Available | Negative | 2888912 - 2890387 | 52661.2 |
| phage shock protein c (pspc) family protein | SAMN04488090_2278 | Not Available | Negative | 2890472 - 2892958 | 90774.6 |
| transcriptional regulator, padr family | SAMN04488090_2279 | Not Available | Negative | 2893004 - 2893345 | 12909.7 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488090_2280 | Not Available | Positive | 2893586 - 2894527 | 35329.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
