Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00255 family protein | SAMN04488090_2261 | Not Available | Positive | 2870678 - 2871544 | 32568.9 |
| dna-3-methyladenine glycosylase | SAMN04488090_2262 | Not Available | Positive | 2871583 - 2872200 | 22601.3 |
| acetyltransferase (gnat) domain-containing protein | SAMN04488090_2263 | Not Available | Positive | 2872197 - 2873135 | 35277.3 |
| acetyl-coa acyltransferase | SAMN04488090_2264 | Not Available | Positive | 2873246 - 2874424 | 41234.7 |
| l-rhamnose-h+ transport protein | SAMN04488090_2265 | Not Available | Positive | 2874814 - 2875872 | 38666.6 |
| substrate-binding protein-like domain-containing protein | SAMN04488090_2266 | Not Available | Negative | 2875873 - 2876913 | 39532.2 |
| hypothetical protein | SAMN04488090_2267 | Not Available | Positive | 2876975 - 2877439 | 17319.8 |
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | SAMN04488090_2268 | Not Available | Positive | 2877529 - 2879634 | 76374.3 |
| l-rhamnose isomerase / sugar isomerase | SAMN04488090_2269 | Not Available | Positive | 2879850 - 2881127 | 46772.5 |
| sugar (pentulose or hexulose) kinase | SAMN04488090_2270 | Not Available | Positive | 2881185 - 2882564 | 52163.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
