Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch synthase | SAMN04488090_2241 | Not Available | Negative | 2842038 - 2842847 | 31284.4 |
| pantothenate synthetase | SAMN04488090_2242 | Not Available | Positive | 2843066 - 2843905 | 30649.9 |
| starch-binding associating with outer membrane | SAMN04488090_2243 | Not Available | Negative | 2844027 - 2845469 | 52053.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2244 | Not Available | Negative | 2845481 - 2848654 | 115696.0 |
| hypothetical protein | SAMN04488090_2245 | Not Available | Positive | 2848676 - 2848879 | 7814.48 |
| abc-2 type transport system atp-binding protein | SAMN04488090_2246 | Not Available | Negative | 2849169 - 2849954 | 28712.0 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04488090_2247 | Not Available | Positive | 2850170 - 2851768 | 57395.9 |
| 2-iminobutanoate/2-iminopropanoate deaminase | SAMN04488090_2248 | Not Available | Positive | 2851772 - 2852212 | 15687.2 |
| hypothetical protein | SAMN04488090_2249 | Not Available | Negative | 2852348 - 2852494 | 5592.94 |
| hypothetical protein | SAMN04488090_2250 | Not Available | Negative | 2852721 - 2853407 | 25045.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
