Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase class d | SAMN04488090_2231 | Not Available | Positive | 2824997 - 2825773 | 29450.6 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488090_2232 | Not Available | Negative | 2825934 - 2827322 | 50096.8 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488090_2233 | Not Available | Negative | 2827347 - 2830502 | 113844.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488090_2234 | Not Available | Negative | 2830554 - 2831732 | 42754.0 |
| signal transduction histidine kinase | SAMN04488090_2235 | Not Available | Negative | 2831847 - 2833190 | 51849.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488090_2236 | Not Available | Negative | 2833180 - 2833866 | 26089.3 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN04488090_2237 | Not Available | Positive | 2834085 - 2836622 | 91182.9 |
| sodium/proton antiporter, cpa1 family | SAMN04488090_2238 | Not Available | Negative | 2836884 - 2838473 | 58876.9 |
| hypothetical protein | SAMN04488090_2239 | Not Available | Negative | 2838577 - 2840016 | 53779.0 |
| peptidase family m28 | SAMN04488090_2240 | Not Available | Negative | 2840075 - 2841691 | 58834.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
