Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMN04488090_2221 | Not Available | Positive | 2815016 - 2815429 | 14834.5 |
| uncharacterized iron-regulated membrane protein | SAMN04488090_2222 | Not Available | Positive | 2815776 - 2816975 | 45161.1 |
| histidine kinase | SAMN04488090_2223 | Not Available | Positive | 2817118 - 2818221 | 42149.3 |
| two component transcriptional regulator, lyttr family | SAMN04488090_2224 | Not Available | Positive | 2818218 - 2818970 | 28591.5 |
| hypothetical protein | SAMN04488090_2225 | Not Available | Negative | 2819029 - 2819841 | 28622.2 |
| hypothetical protein | SAMN04488090_2226 | Not Available | Negative | 2819838 - 2820692 | 31607.4 |
| putative zinc-finger | SAMN04488090_2227 | Not Available | Negative | 2820716 - 2821492 | 29280.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_2228 | Not Available | Negative | 2821482 - 2822036 | 21597.9 |
| protein of unknown function | SAMN04488090_2229 | Not Available | Negative | 2822102 - 2822773 | 25288.7 |
| patatin-like phospholipase | SAMN04488090_2230 | Not Available | Negative | 2822896 - 2824866 | 73915.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
