Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase | SAMN04488090_2201 | Not Available | Negative | 2787397 - 2789535 | 82392.7 |
| hypothetical protein | SAMN04488090_2202 | Not Available | Negative | 2789703 - 2789924 | 8301.75 |
| dna gyrase subunit b | SAMN04488090_2203 | Not Available | Negative | 2789985 - 2791964 | 73138.2 |
| selenocysteine lyase/cysteine desulfurase | SAMN04488090_2204 | Not Available | Positive | 2792232 - 2793374 | 42203.4 |
| saccharopine dehydrogenase, nadp-dependent | SAMN04488090_2205 | Not Available | Negative | 2793376 - 2794425 | 38736.8 |
| hypothetical protein | SAMN04488090_2206 | Not Available | Negative | 2794510 - 2794962 | 16516.5 |
| hypothetical protein | SAMN04488090_2207 | Not Available | Negative | 2794964 - 2795365 | 15358.0 |
| alanine dehydrogenase | SAMN04488090_2208 | Not Available | Negative | 2795386 - 2796618 | 45168.7 |
| hypothetical protein | SAMN04488090_2209 | Not Available | Positive | 2796873 - 2797982 | 42311.7 |
| hypothetical protein | SAMN04488090_2210 | Not Available | Positive | 2798016 - 2798213 | 7587.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
