Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488090_0210 | Not Available | Positive | 273076 - 274284 | 43835.9 |
| uncharacterized iron-regulated membrane protein | SAMN04488090_0211 | Not Available | Positive | 274289 - 275575 | 48748.3 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488090_0212 | Not Available | Positive | 275605 - 278034 | 90344.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0213 | Not Available | Positive | 278474 - 280867 | 84974.6 |
| transcriptional regulator padr-like family protein | SAMN04488090_0214 | Not Available | Positive | 281069 - 281419 | 12958.5 |
| putative abc transport system permease protein | SAMN04488090_0215 | Not Available | Positive | 281416 - 284043 | 97764.2 |
| acetyl esterase/lipase | SAMN04488090_0216 | Not Available | Positive | 284102 - 285001 | 33227.1 |
| hexosaminidase | SAMN04488090_0217 | Not Available | Negative | 285037 - 287103 | 76363.8 |
| transcriptional regulator, tetr family | SAMN04488090_0218 | Not Available | Negative | 287110 - 287718 | 23177.1 |
| protein of unknown function | SAMN04488090_0219 | Not Available | Negative | 287881 - 290850 | 112913.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
