Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_2191 | Not Available | Positive | 2779005 - 2780048 | 39444.6 |
| inorganic pyrophosphatase | SAMN04488090_2192 | Not Available | Positive | 2780108 - 2780734 | 23328.9 |
| protease-4 | SAMN04488090_2193 | Not Available | Positive | 2780886 - 2782655 | 65121.0 |
| winged helix-turn helix | SAMN04488090_2194 | Not Available | Negative | 2782712 - 2783119 | 16347.0 |
| hypothetical protein | SAMN04488090_2195 | Not Available | Negative | 2783307 - 2783435 | 4640.77 |
| n-acetylglutamate synthase, gnat family | SAMN04488090_2196 | Not Available | Negative | 2783475 - 2783909 | 16098.3 |
| methyltransferase domain-containing protein | SAMN04488090_2197 | Not Available | Negative | 2783911 - 2784441 | 19681.5 |
| concentrative nucleoside transporter, cnt family | SAMN04488090_2198 | Not Available | Negative | 2784443 - 2785684 | 44208.3 |
| predicted lipoprotein with conserved yx(fwy)xxd motif | SAMN04488090_2199 | Not Available | Positive | 2785866 - 2786699 | 29685.8 |
| hypothetical protein | SAMN04488090_2200 | Not Available | Negative | 2786834 - 2787349 | 20266.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
