Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488090_2181 | Not Available | Positive | 2767713 - 2769176 | 53764.5 |
| arylsulfatase a | SAMN04488090_2182 | Not Available | Positive | 2769243 - 2770769 | 58429.2 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04488090_2183 | Not Available | Positive | 2770776 - 2771855 | 39232.9 |
| l-threonine aldolase | SAMN04488090_2184 | Not Available | Negative | 2771933 - 2772952 | 36867.3 |
| formyltetrahydrofolate deformylase | SAMN04488090_2185 | Not Available | Negative | 2772949 - 2773785 | 31568.2 |
| protein of unknown function | SAMN04488090_2186 | Not Available | Negative | 2773862 - 2774440 | 19876.7 |
| sodium/proton antiporter, cpa1 family | SAMN04488090_2187 | Not Available | Negative | 2774454 - 2775680 | 44701.5 |
| atp-binding cassette, subfamily b | SAMN04488090_2188 | Not Available | Positive | 2775839 - 2777599 | 66341.1 |
| ribonuclease hi | SAMN04488090_2189 | Not Available | Positive | 2777559 - 2778257 | 26158.0 |
| trna1val (adenine37-n6)-methyltransferase | SAMN04488090_2190 | Not Available | Positive | 2778267 - 2778989 | 27029.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
