Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duplicated orphan permease | SAMN04488090_2171 | Not Available | Positive | 2743810 - 2746182 | 88697.0 |
| putative abc transport system permease protein | SAMN04488090_2172 | Not Available | Positive | 2746241 - 2748649 | 90448.7 |
| putative abc transport system permease protein | SAMN04488090_2173 | Not Available | Positive | 2748677 - 2751136 | 91499.7 |
| duplicated orphan permease | SAMN04488090_2174 | Not Available | Positive | 2751138 - 2753474 | 86675.6 |
| duplicated orphan permease | SAMN04488090_2175 | Not Available | Positive | 2753476 - 2755833 | 87524.5 |
| putative abc transport system permease protein | SAMN04488090_2176 | Not Available | Positive | 2755978 - 2758422 | 91233.9 |
| hypothetical protein | SAMN04488090_2177 | Not Available | Positive | 2758743 - 2759033 | 11316.6 |
| putative abc transport system permease protein | SAMN04488090_2178 | Not Available | Positive | 2759097 - 2761514 | 89250.9 |
| putative abc transport system permease protein | SAMN04488090_2179 | Not Available | Positive | 2761540 - 2763957 | 89043.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2180 | Not Available | Positive | 2764639 - 2767692 | 109553.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
