Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bnr repeat-like domain-containing protein | SAMN04488090_2151 | Not Available | Positive | 2725714 - 2726760 | 37541.7 |
| acyl-coa hydrolase | SAMN04488090_2152 | Not Available | Negative | 2726787 - 2727188 | 14726.7 |
| cysteine-rich cwc | SAMN04488090_2153 | Not Available | Negative | 2727185 - 2727382 | 7123.71 |
| hypothetical protein | SAMN04488090_2154 | Not Available | Negative | 2727552 - 2728076 | 20111.2 |
| hypothetical protein | SAMN04488090_2155 | Not Available | Negative | 2728107 - 2728415 | 11808.2 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04488090_2156 | Not Available | Negative | 2728720 - 2728926 | 7870.67 |
| putative transcriptional regulator | SAMN04488090_2157 | Not Available | Negative | 2728943 - 2729167 | 8197.9 |
| hypothetical protein | SAMN04488090_2158 | Not Available | Positive | 2729304 - 2729501 | 7538.28 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488090_2159 | Not Available | Positive | 2729802 - 2731034 | 45293.1 |
| Trna-asp | Not Available | Not Available | Positive | 2731176 - 2731252 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
