Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488090_2130 | Not Available | Positive | 2697000 - 2698502 | 55112.3 |
| hypothetical protein | SAMN04488090_2131 | Not Available | Positive | 2698521 - 2699015 | 17891.6 |
| histidinol-phosphate aminotransferase | SAMN04488090_2132 | Not Available | Positive | 2699024 - 2700142 | 40698.0 |
| interferon-induced transmembrane protein | SAMN04488090_2133 | Not Available | Positive | 2700415 - 2700741 | 11716.4 |
| protein of unknown function | SAMN04488090_2134 | Not Available | Positive | 2700753 - 2701178 | 16076.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_2135 | Not Available | Negative | 2701497 - 2704451 | 107980.0 |
| aldose 1-epimerase | SAMN04488090_2136 | Not Available | Positive | 2704720 - 2705694 | 35488.5 |
| alpha-glucosidase | SAMN04488090_2137 | Not Available | Positive | 2705691 - 2707631 | 72109.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2138 | Not Available | Positive | 2708008 - 2711043 | 111860.0 |
| starch-binding associating with outer membrane | SAMN04488090_2139 | Not Available | Positive | 2711056 - 2712588 | 58001.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
