Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488090_2110 | Not Available | Positive | 2675990 - 2677471 | 54673.4 |
| sugar lactone lactonase yvre | SAMN04488090_2111 | Not Available | Positive | 2677518 - 2678348 | 30026.0 |
| hypothetical protein | SAMN04488090_2112 | Not Available | Positive | 2678372 - 2679415 | 38974.0 |
| uncharacterized membrane protein | SAMN04488090_2113 | Not Available | Positive | 2679491 - 2680933 | 52110.2 |
| Trna-glu | Not Available | Not Available | Positive | 2681113 - 2681187 | Not Available |
| hypothetical protein | SAMN04488090_2115 | Not Available | Negative | 2681296 - 2681934 | 24657.6 |
| metallopeptidase toxin 3 | SAMN04488090_2116 | Not Available | Positive | 2683082 - 2683891 | 30288.6 |
| hypothetical protein | SAMN04488090_2117 | Not Available | Positive | 2683870 - 2684355 | 18131.7 |
| hypothetical protein | SAMN04488090_2118 | Not Available | Negative | 2684626 - 2684871 | 8867.61 |
| Trna-glu | Not Available | Not Available | Positive | 2685044 - 2685115 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
