Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transmembrane family 220, helix | SAMN04488090_2100 | Not Available | Positive | 2663481 - 2663825 | 13129.2 |
| acetyl-coa hydrolase | SAMN04488090_2101 | Not Available | Negative | 2663850 - 2665340 | 54245.2 |
| sugar phosphate isomerase/epimerase | SAMN04488090_2102 | Not Available | Negative | 2665670 - 2666557 | 33119.0 |
| protein of unknown function | SAMN04488090_2103 | Not Available | Negative | 2666696 - 2667409 | 26337.2 |
| hypothetical protein | SAMN04488090_2104 | Not Available | Negative | 2667410 - 2667844 | 16990.1 |
| sugar phosphate isomerase/epimerase | SAMN04488090_2105 | Not Available | Negative | 2667940 - 2668992 | 39107.1 |
| predicted dehydrogenase | SAMN04488090_2106 | Not Available | Negative | 2669056 - 2670201 | 42540.9 |
| predicted dehydrogenase | SAMN04488090_2107 | Not Available | Negative | 2670250 - 2671404 | 42473.8 |
| predicted arabinose efflux permease, mfs family | SAMN04488090_2108 | Not Available | Positive | 2671694 - 2672941 | 44723.6 |
| planctomycete cytochrome c | SAMN04488090_2109 | Not Available | Positive | 2673135 - 2675894 | 104447.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
