Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | SAMN04488090_0200 | Not Available | Positive | 261498 - 262514 | 38603.2 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488090_0201 | Not Available | Positive | 262528 - 263982 | 55329.2 |
| two component transcriptional regulator, lyttr family | SAMN04488090_0202 | Not Available | Positive | 263979 - 264641 | 24596.9 |
| xylan 1,4-beta-xylosidase | SAMN04488090_0203 | Not Available | Positive | 264704 - 266380 | 62632.4 |
| hypothetical protein | SAMN04488090_0204 | Not Available | Positive | 266472 - 266828 | 13507.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_0205 | Not Available | Positive | 266903 - 267424 | 20450.4 |
| hypothetical protein | SAMN04488090_0206 | Not Available | Positive | 267489 - 268103 | 22286.9 |
| hypothetical protein | SAMN04488090_0207 | Not Available | Positive | 268093 - 269262 | 44712.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488090_0208 | Not Available | Positive | 269447 - 271822 | 88765.9 |
| protein of unknown function | SAMN04488090_0209 | Not Available | Positive | 271847 - 273058 | 43330.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
