Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s20p | SAMN04488090_2080 | Not Available | Positive | 2635509 - 2635766 | 9729.03 |
| dna replication and repair protein radc | SAMN04488090_2081 | Not Available | Positive | 2635836 - 2636540 | 26048.8 |
| chat domain-containing protein | SAMN04488090_2082 | Not Available | Negative | 2636512 - 2639217 | 101316.0 |
| subtilase family protein | SAMN04488090_2083 | Not Available | Negative | 2639195 - 2640676 | 54029.2 |
| hypothetical protein | SAMN04488090_2084 | Not Available | Negative | 2640709 - 2641425 | 26804.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_2085 | Not Available | Negative | 2641422 - 2642015 | 22456.9 |
| hypothetical protein | SAMN04488090_2086 | Not Available | Negative | 2642012 - 2642830 | 29468.6 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_2087 | Not Available | Negative | 2643069 - 2644475 | 52961.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_2088 | Not Available | Positive | 2644679 - 2646679 | 74304.4 |
| fumarase, class ii | SAMN04488090_2089 | Not Available | Positive | 2646811 - 2648208 | 50504.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
