Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN04488090_2070 | Not Available | Positive | 2624692 - 2625717 | 39253.0 |
| chromosome segregation atpase | SAMN04488090_2071 | Not Available | Positive | 2625843 - 2626673 | 30056.4 |
| chromosome partitioning protein, parb family | SAMN04488090_2072 | Not Available | Positive | 2626751 - 2627662 | 34279.2 |
| hypothetical protein | SAMN04488090_2073 | Not Available | Positive | 2627736 - 2628356 | 22793.5 |
| dihydrodipicolinate reductase | SAMN04488090_2074 | Not Available | Positive | 2628400 - 2629113 | 25650.6 |
| signal peptidase i | SAMN04488090_2075 | Not Available | Positive | 2629136 - 2630260 | 43157.8 |
| solute:na+ symporter, sss family | SAMN04488090_2076 | Not Available | Positive | 2630494 - 2632104 | 59502.0 |
| inositol oxygenase | SAMN04488090_2077 | Not Available | Positive | 2632233 - 2633108 | 34864.8 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04488090_2078 | Not Available | Negative | 2633159 - 2634337 | 44087.3 |
| s1/p1 nuclease | SAMN04488090_2079 | Not Available | Negative | 2634361 - 2635314 | 36851.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
