Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulphide bond corrector protein dsbc | SAMN04488090_2060 | Not Available | Negative | 2614323 - 2614796 | 18135.6 |
| polyisoprenoid-binding protein ycei | SAMN04488090_2061 | Not Available | Negative | 2614793 - 2615407 | 21931.2 |
| peroxiredoxin | SAMN04488090_2062 | Not Available | Negative | 2615487 - 2616914 | 52899.6 |
| peptidase family s41 | SAMN04488090_2063 | Not Available | Negative | 2617215 - 2618378 | 43540.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488090_2064 | Not Available | Negative | 2618378 - 2619106 | 27440.4 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488090_2065 | Not Available | Negative | 2619303 - 2619992 | 26632.9 |
| orotate phosphoribosyltransferase | SAMN04488090_2066 | Not Available | Positive | 2620007 - 2620768 | 27220.9 |
| tetratricopeptide repeat-containing protein | SAMN04488090_2067 | Not Available | Negative | 2620794 - 2621603 | 30202.7 |
| dna processing protein | SAMN04488090_2068 | Not Available | Negative | 2621648 - 2622739 | 39363.6 |
| cytochrome c peroxidase | SAMN04488090_2069 | Not Available | Positive | 2622945 - 2624690 | 64507.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
