Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN04488090_2050 | Not Available | Negative | 2603610 - 2604293 | 24373.4 |
| s-adenosylmethionine--trna ribosyltransferase-isomerase | SAMN04488090_2051 | Not Available | Negative | 2604318 - 2605373 | 39815.6 |
| putative abc transport system permease protein | SAMN04488090_2052 | Not Available | Positive | 2605581 - 2606828 | 46689.1 |
| hypothetical protein | SAMN04488090_2053 | Not Available | Positive | 2606942 - 2607322 | 14415.3 |
| protein of unknown function | SAMN04488090_2054 | Not Available | Positive | 2607309 - 2608157 | 32200.6 |
| phosphopantetheine adenylyltransferase | SAMN04488090_2055 | Not Available | Positive | 2608170 - 2608628 | 17312.6 |
| cysteine desulfurase | SAMN04488090_2056 | Not Available | Negative | 2608625 - 2609779 | 41364.8 |
| protein of unknown function | SAMN04488090_2057 | Not Available | Negative | 2609809 - 2610555 | 25925.6 |
| iron complex outermembrane recepter protein | SAMN04488090_2058 | Not Available | Negative | 2610591 - 2613329 | 98355.5 |
| cytochrome c peroxidase | SAMN04488090_2059 | Not Available | Negative | 2613391 - 2614326 | 34675.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
