Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2040 | Not Available | Negative | 2595404 - 2595748 | 12632.3 |
| glycogen recognition site of amp-activated protein kinase | SAMN04488090_2041 | Not Available | Negative | 2596090 - 2596398 | 11167.1 |
| protein tonb | SAMN04488090_2042 | Not Available | Negative | 2596584 - 2597396 | 30037.2 |
| tfp pilus assembly protein pilf | SAMN04488090_2043 | Not Available | Negative | 2597474 - 2598730 | 47245.7 |
| protein tonb | SAMN04488090_2044 | Not Available | Negative | 2598730 - 2599107 | 13618.6 |
| tonb family c-terminal domain-containing protein | SAMN04488090_2045 | Not Available | Negative | 2599191 - 2600417 | 47602.9 |
| predicted transcriptional regulator | SAMN04488090_2046 | Not Available | Negative | 2600451 - 2600822 | 14358.5 |
| tigr01244 family protein | SAMN04488090_2047 | Not Available | Negative | 2600978 - 2601496 | 19508.8 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN04488090_2048 | Not Available | Negative | 2601590 - 2602546 | 35075.7 |
| methylmalonyl-coa mutase metallochaperone meab | SAMN04488090_2049 | Not Available | Negative | 2602626 - 2603606 | 36118.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
