Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_2030 | Not Available | Positive | 2583853 - 2584428 | 22722.3 |
| fecr family protein | SAMN04488090_2031 | Not Available | Positive | 2584516 - 2585484 | 37000.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2032 | Not Available | Positive | 2585639 - 2589037 | 125612.0 |
| starch-binding associating with outer membrane | SAMN04488090_2033 | Not Available | Positive | 2589044 - 2590795 | 66870.2 |
| putative atpase | SAMN04488090_2034 | Not Available | Negative | 2590963 - 2592237 | 47563.2 |
| hypothetical protein | SAMN04488090_2035 | Not Available | Positive | 2592632 - 2593288 | 24935.8 |
| hypothetical protein | SAMN04488090_2036 | Not Available | Positive | 2593285 - 2593449 | 6001.55 |
| signal transduction histidine kinase | SAMN04488090_2037 | Not Available | Positive | 2593439 - 2594260 | 30629.1 |
| two component transcriptional regulator, luxr family | SAMN04488090_2038 | Not Available | Positive | 2594267 - 2594920 | 24422.8 |
| uncharacterized conserved protein ytfp, gamma-glutamylcyclotransferase (ggct)/aig2-like family | SAMN04488090_2039 | Not Available | Negative | 2594917 - 2595309 | 15392.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
