Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN04488090_2010 | Not Available | Positive | 2550815 - 2551201 | 14945.9 |
| hypothetical protein | SAMN04488090_2011 | Not Available | Negative | 2551444 - 2551662 | 8423.8 |
| putative restriction endonuclease | SAMN04488090_2012 | Not Available | Negative | 2551664 - 2552431 | 29894.9 |
| Trna-pro | Not Available | Not Available | Positive | 2552594 - 2552670 | Not Available |
| hypothetical protein | SAMN04488090_2014 | Not Available | Negative | 2552796 - 2555156 | 89475.7 |
| tonb-dependent receptor | SAMN04488090_2015 | Not Available | Positive | 2555507 - 2558371 | 106388.0 |
| ipt/tig domain-containing protein | SAMN04488090_2016 | Not Available | Positive | 2558413 - 2560086 | 58073.9 |
| hypothetical protein | SAMN04488090_2017 | Not Available | Positive | 2560243 - 2561613 | 51069.2 |
| ssu ribosomal protein s1p | SAMN04488090_2018 | Not Available | Positive | 2561809 - 2563614 | 67442.7 |
| Trna-cys | Not Available | Not Available | Positive | 2563805 - 2563875 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
