Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1990 | Not Available | Positive | 2524881 - 2525060 | 6865.52 |
| hypothetical protein | SAMN04488090_1991 | Not Available | Negative | 2525182 - 2526030 | 31687.7 |
| membrane protein | SAMN04488090_1992 | Not Available | Negative | 2526042 - 2526992 | 35296.9 |
| hypothetical protein | SAMN04488090_1993 | Not Available | Positive | 2527192 - 2527344 | 5391.16 |
| hypothetical protein | SAMN04488090_1994 | Not Available | Positive | 2527373 - 2527549 | 6484.93 |
| outer membrane protein | SAMN04488090_1995 | Not Available | Positive | 2527843 - 2529285 | 53095.1 |
| hlyd family secretion protein | SAMN04488090_1996 | Not Available | Positive | 2529336 - 2530712 | 49782.4 |
| dna replication and repair protein recf | SAMN04488090_1997 | Not Available | Negative | 2530834 - 2531958 | 42833.0 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN04488090_1998 | Not Available | Positive | 2532077 - 2533093 | 37701.7 |
| glycerol kinase | SAMN04488090_1999 | Not Available | Negative | 2533579 - 2535069 | 54498.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
