Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488090_1980 | Not Available | Positive | 2513593 - 2514132 | 20248.4 |
| protein of unknown function | SAMN04488090_1981 | Not Available | Positive | 2514152 - 2514694 | 19155.6 |
| abc-2 type transport system permease protein | SAMN04488090_1982 | Not Available | Positive | 2514702 - 2515427 | 26792.2 |
| protein of unknown function | SAMN04488090_1983 | Not Available | Positive | 2515439 - 2516677 | 46374.5 |
| protein of unknown function | SAMN04488090_1984 | Not Available | Negative | 2516744 - 2517193 | 16355.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488090_1985 | Not Available | Negative | 2517224 - 2520610 | 122393.0 |
| abc transporter | SAMN04488090_1986 | Not Available | Negative | 2520737 - 2521342 | 22839.5 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN04488090_1987 | Not Available | Negative | 2521384 - 2522178 | 28467.3 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase /udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | SAMN04488090_1988 | Not Available | Negative | 2522224 - 2523618 | 51344.6 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN04488090_1989 | Not Available | Negative | 2523699 - 2524754 | 38034.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
