Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| do/deqq family serine protease | SAMN04488090_1970 | Not Available | Negative | 2502943 - 2504469 | 53844.3 |
| hsp20 family protein | SAMN04488090_1971 | Not Available | Negative | 2504753 - 2505181 | 16070.9 |
| protein of unknown function | SAMN04488090_1972 | Not Available | Positive | 2505487 - 2505711 | 8696.09 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_1973 | Not Available | Positive | 2505715 - 2506275 | 21817.1 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN04488090_1974 | Not Available | Negative | 2506272 - 2506988 | 26564.5 |
| tagaturonate reductase | SAMN04488090_1975 | Not Available | Positive | 2507083 - 2508609 | 56764.6 |
| altronate hydrolase | SAMN04488090_1976 | Not Available | Positive | 2508707 - 2510359 | 59118.5 |
| d-mannonate dehydratase | SAMN04488090_1977 | Not Available | Positive | 2510457 - 2511659 | 45187.9 |
| glycine cleavage system h protein | SAMN04488090_1978 | Not Available | Positive | 2511783 - 2512163 | 13670.9 |
| dihydroorotase | SAMN04488090_1979 | Not Available | Positive | 2512294 - 2513592 | 47566.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
