Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, gt2 family | SAMN04488090_1950 | Not Available | Positive | 2479827 - 2480582 | 28930.7 |
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | SAMN04488090_1951 | Not Available | Positive | 2480642 - 2483002 | 86880.1 |
| g-rich domain on putative tyrosine kinase | SAMN04488090_1952 | Not Available | Positive | 2483024 - 2484082 | 38992.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_1953 | Not Available | Positive | 2484073 - 2485155 | 42274.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_1954 | Not Available | Positive | 2485203 - 2486192 | 38236.4 |
| o-antigen polysaccharide polymerase wzy | SAMN04488090_1955 | Not Available | Positive | 2486183 - 2487610 | 53764.7 |
| udp-galactopyranose mutase | SAMN04488090_1956 | Not Available | Positive | 2487735 - 2488976 | 47324.4 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488090_1957 | Not Available | Positive | 2488963 - 2490423 | 54908.0 |
| hypothetical protein | SAMN04488090_1958 | Not Available | Positive | 2490392 - 2491345 | 36786.2 |
| hypothetical protein | SAMN04488090_1959 | Not Available | Positive | 2491364 - 2492959 | 55125.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
