Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-mannosidase, putative | SAMN04488090_1940 | Not Available | Negative | 2467901 - 2470186 | 84958.8 |
| fructosamine-3-kinase | SAMN04488090_1941 | Not Available | Negative | 2470260 - 2471138 | 33051.4 |
| zinc carboxypeptidase | SAMN04488090_1942 | Not Available | Negative | 2471160 - 2472419 | 47305.6 |
| hypothetical protein | SAMN04488090_1943 | Not Available | Negative | 2472438 - 2473022 | 21683.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_1944 | Not Available | Positive | 2473170 - 2473709 | 21051.9 |
| hypothetical protein | SAMN04488090_1945 | Not Available | Positive | 2473782 - 2474378 | 23203.8 |
| hypothetical protein | SAMN04488090_1946 | Not Available | Positive | 2474362 - 2475441 | 40602.1 |
| phospholipase/carboxylesterase | SAMN04488090_1947 | Not Available | Negative | 2475493 - 2476131 | 23442.0 |
| gtp-binding protein | SAMN04488090_1948 | Not Available | Positive | 2476465 - 2478282 | 67623.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_1949 | Not Available | Positive | 2478394 - 2479821 | 55110.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
