Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pbcv-specific basic adaptor domain-containing protein | SAMN04488090_1920 | Not Available | Positive | 2435514 - 2436218 | 24205.5 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN04488090_1921 | Not Available | Negative | 2436631 - 2438391 | 63310.7 |
| h+/cl-antiporter clca | SAMN04488090_1922 | Not Available | Negative | 2438469 - 2439854 | 50049.0 |
| thioredoxin reductase | SAMN04488090_1923 | Not Available | Negative | 2439967 - 2440866 | 31996.1 |
| arylsulfatase a | SAMN04488090_1924 | Not Available | Negative | 2440917 - 2442368 | 54632.5 |
| tigr02453 family protein | SAMN04488090_1925 | Not Available | Negative | 2442457 - 2443146 | 26509.1 |
| atp-binding cassette, subfamily b | SAMN04488090_1926 | Not Available | Positive | 2443249 - 2445078 | 68752.8 |
| cell surface protein spra | SAMN04488090_1927 | Not Available | Negative | 2445218 - 2452441 | 272679.0 |
| holliday junction dna helicase subunit ruva | SAMN04488090_1928 | Not Available | Negative | 2452637 - 2453230 | 21188.0 |
| membrane-bound lytic murein transglycosylase d | SAMN04488090_1929 | Not Available | Negative | 2453302 - 2454723 | 54313.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
