Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN04488090_1900 | Not Available | Negative | 2408787 - 2410748 | 73613.2 |
| sugar phosphate permease | SAMN04488090_1901 | Not Available | Positive | 2410888 - 2412126 | 44053.5 |
| hypothetical protein | SAMN04488090_1902 | Not Available | Positive | 2412329 - 2413093 | 29033.2 |
| hypothetical protein | SAMN04488090_1903 | Not Available | Negative | 2413147 - 2413848 | 25918.6 |
| transcriptional regulator, lyttr family | SAMN04488090_1904 | Not Available | Negative | 2413978 - 2414820 | 31099.7 |
| membrane associated serine protease, rhomboid family | SAMN04488090_1905 | Not Available | Negative | 2414824 - 2415447 | 23445.4 |
| selenocysteine lyase/cysteine desulfurase | SAMN04488090_1906 | Not Available | Positive | 2415579 - 2416889 | 48887.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_1907 | Not Available | Positive | 2417061 - 2419142 | 71458.2 |
| sulfate permease, sulp family | SAMN04488090_1908 | Not Available | Negative | 2419214 - 2420788 | 55925.3 |
| hypothetical protein | SAMN04488090_1909 | Not Available | Negative | 2420808 - 2421086 | 10512.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
