Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN04488090_0179 | Not Available | Positive | 231281 - 231931 | 24603.1 |
| hypothetical protein | SAMN04488090_0180 | Not Available | Positive | 231997 - 232380 | 14802.7 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04488090_0181 | Not Available | Positive | 232472 - 236734 | 155762.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04488090_0182 | Not Available | Positive | 236742 - 237884 | 41693.8 |
| hypothetical protein | SAMN04488090_0183 | Not Available | Negative | 237918 - 239546 | 60429.2 |
| two component transcriptional regulator, lyttr family | SAMN04488090_0184 | Not Available | Negative | 239650 - 240351 | 26289.8 |
| nlpe n-terminal domain-containing protein | SAMN04488090_0185 | Not Available | Negative | 240353 - 240844 | 18491.2 |
| hypothetical protein | SAMN04488090_0186 | Not Available | Negative | 240841 - 241290 | 16721.2 |
| histidine kinase | SAMN04488090_0187 | Not Available | Negative | 241303 - 242367 | 40843.7 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN04488090_0188 | Not Available | Positive | 242576 - 243202 | 23522.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
