Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein, steroid delta-isomerase-related | SAMN04488090_1890 | Not Available | Negative | 2399437 - 2399838 | 15294.2 |
| ligand-binding srpbcc domain-containing protein | SAMN04488090_1891 | Not Available | Positive | 2399947 - 2400447 | 19570.4 |
| diacylglycerol kinase family enzyme | SAMN04488090_1892 | Not Available | Positive | 2400516 - 2401391 | 31506.5 |
| atp-dependent rna helicase rhle | SAMN04488090_1893 | Not Available | Negative | 2401388 - 2402764 | 51169.2 |
| phage derived protein gp49-like | SAMN04488090_1894 | Not Available | Positive | 2403005 - 2403367 | 14608.7 |
| helix-turn-helix | SAMN04488090_1895 | Not Available | Positive | 2403348 - 2403653 | 11348.7 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488090_1896 | Not Available | Positive | 2403783 - 2406101 | 88066.5 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488090_1897 | Not Available | Positive | 2406205 - 2407299 | 40662.5 |
| cytochrome c peroxidase | SAMN04488090_1898 | Not Available | Negative | 2407281 - 2408306 | 37950.2 |
| hypothetical protein | SAMN04488090_1899 | Not Available | Negative | 2408308 - 2408790 | 17220.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
