Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l6p | SAMN04488090_1860 | Not Available | Positive | 2368270 - 2368827 | 20018.7 |
| large subunit ribosomal protein l18 | SAMN04488090_1861 | Not Available | Positive | 2368924 - 2369271 | 12250.7 |
| ssu ribosomal protein s5p | SAMN04488090_1862 | Not Available | Positive | 2369283 - 2369795 | 17892.9 |
| lsu ribosomal protein l30p | SAMN04488090_1863 | Not Available | Positive | 2369854 - 2370033 | 6580.21 |
| lsu ribosomal protein l15p | SAMN04488090_1864 | Not Available | Positive | 2370081 - 2370527 | 15639.0 |
| protein translocase subunit secy/sec61 alpha | SAMN04488090_1865 | Not Available | Positive | 2370574 - 2371896 | 48212.9 |
| methionine aminopeptidase, type i | SAMN04488090_1866 | Not Available | Positive | 2371907 - 2372698 | 28900.7 |
| bacterial translation initiation factor 1 (bif-1) | SAMN04488090_1867 | Not Available | Positive | 2372754 - 2372972 | 8338.35 |
| lsu ribosomal protein l36p | SAMN04488090_1868 | Not Available | Positive | 2373024 - 2373140 | 4490.75 |
| small subunit ribosomal protein s13 | SAMN04488090_1869 | Not Available | Positive | 2373172 - 2373549 | 13994.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
