Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l22p | SAMN04488090_1850 | Not Available | Positive | 2363624 - 2364004 | 14099.2 |
| ssu ribosomal protein s3p | SAMN04488090_1851 | Not Available | Positive | 2364011 - 2364889 | 31416.8 |
| large subunit ribosomal protein l16 | SAMN04488090_1852 | Not Available | Positive | 2364948 - 2365373 | 15952.7 |
| lsu ribosomal protein l29p | SAMN04488090_1853 | Not Available | Positive | 2365448 - 2365630 | 7020.76 |
| ssu ribosomal protein s17p | SAMN04488090_1854 | Not Available | Positive | 2365666 - 2365926 | 10065.6 |
| lsu ribosomal protein l14p | SAMN04488090_1855 | Not Available | Positive | 2366034 - 2366402 | 13420.4 |
| lsu ribosomal protein l24p | SAMN04488090_1856 | Not Available | Positive | 2366433 - 2366765 | 12031.5 |
| lsu ribosomal protein l5p | SAMN04488090_1857 | Not Available | Positive | 2366842 - 2367396 | 20288.0 |
| ssu ribosomal protein s14p | SAMN04488090_1858 | Not Available | Positive | 2367455 - 2367724 | 10192.5 |
| ssu ribosomal protein s8p | SAMN04488090_1859 | Not Available | Positive | 2367800 - 2368195 | 14630.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
