Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii pantothenate kinase | SAMN04488090_1830 | Not Available | Positive | 2342802 - 2343536 | 26582.2 |
| long-chain fatty acid transport protein | SAMN04488090_1831 | Not Available | Positive | 2343529 - 2344836 | 48179.8 |
| lps export abc transporter protein lptc | SAMN04488090_1832 | Not Available | Positive | 2344875 - 2345390 | 19892.9 |
| cytochrome c | SAMN04488090_1833 | Not Available | Negative | 2345393 - 2345812 | 15355.6 |
| hypothetical protein | SAMN04488090_1834 | Not Available | Positive | 2345863 - 2346042 | 6653.09 |
| atp-binding cassette, subfamily b, msba | SAMN04488090_1835 | Not Available | Positive | 2346039 - 2347862 | 67618.3 |
| trna (guanine-n(7)-)-methyltransferase | SAMN04488090_1836 | Not Available | Negative | 2347930 - 2348676 | 28931.7 |
| helicase conserved c-terminal domain-containing protein | SAMN04488090_1837 | Not Available | Negative | 2348837 - 2351764 | 113492.0 |
| acetyl-coa carboxylase, carboxyltransferase component | SAMN04488090_1838 | Not Available | Positive | 2351855 - 2353657 | 65178.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_1839 | Not Available | Positive | 2353635 - 2354708 | 40488.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
