Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase a | SAMN04488090_0169 | Not Available | Positive | 216753 - 218288 | 56336.3 |
| hypothetical protein | SAMN04488090_0170 | Not Available | Positive | 218476 - 219567 | 41344.9 |
| hypothetical protein | SAMN04488090_0171 | Not Available | Negative | 219596 - 220249 | 24460.3 |
| two component transcriptional regulator, lyttr family | SAMN04488090_0172 | Not Available | Negative | 220310 - 221053 | 28324.4 |
| histidine kinase | SAMN04488090_0173 | Not Available | Negative | 221058 - 222137 | 41055.3 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488090_0174 | Not Available | Negative | 222163 - 223551 | 51432.4 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | SAMN04488090_0175 | Not Available | Negative | 223548 - 226679 | 113457.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488090_0176 | Not Available | Negative | 226685 - 227812 | 40567.7 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04488090_0177 | Not Available | Positive | 228011 - 228883 | 30971.8 |
| signal transduction histidine kinase | SAMN04488090_0178 | Not Available | Positive | 229088 - 231103 | 74831.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
