Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme oxygenase | SAMN04488090_1779 | Not Available | Negative | 2274519 - 2275085 | 20886.4 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN04488090_1780 | Not Available | Negative | 2275078 - 2275482 | 15276.3 |
| bacteriophytochrome (light-regulated signal transduction histidine kinase) | SAMN04488090_1781 | Not Available | Negative | 2275488 - 2277668 | 81895.0 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488090_1782 | Not Available | Positive | 2277856 - 2278860 | 36936.2 |
| 5-methylcytosine-specific restriction endonuclease mcra | SAMN04488090_1783 | Not Available | Positive | 2279005 - 2279529 | 20074.5 |
| holliday junction dna helicase subunit ruvb | SAMN04488090_1784 | Not Available | Positive | 2279592 - 2280617 | 37825.5 |
| hypothetical protein | SAMN04488090_1785 | Not Available | Positive | 2280854 - 2281003 | 5601.11 |
| pimeloyl-acp methyl ester carboxylesterase' /ribosomal slippage | SAMN04488090_1786 | Not Available | Negative | 2281023 - 2281778 | 28031.2 |
| peptidyl-prolyl cis-trans isomerase d | SAMN04488090_1788 | Not Available | Negative | 2283057 - 2285180 | 77592.0 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN04488090_1789 | Not Available | Positive | 2285387 - 2286382 | 36994.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
