Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1768 | Not Available | Negative | 2258886 - 2259971 | 41170.2 |
| hypothetical protein | SAMN04488090_1769 | Not Available | Negative | 2259978 - 2260598 | 23619.6 |
| hypothetical protein | SAMN04488090_1770 | Not Available | Negative | 2260595 - 2261713 | 42341.1 |
| phosphoadenosine phosphosulfate reductase family protein | SAMN04488090_1771 | Not Available | Negative | 2261751 - 2262872 | 43587.6 |
| hypothetical protein | SAMN04488090_1772 | Not Available | Negative | 2262869 - 2266147 | 126658.0 |
| protein of unknown function | SAMN04488090_1773 | Not Available | Negative | 2266137 - 2267066 | 35542.0 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488090_1775 | Not Available | Negative | 2267710 - 2268864 | 42283.4 |
| hypothetical protein | SAMN04488090_1776 | Not Available | Negative | 2269036 - 2270142 | 42184.3 |
| hypothetical protein | SAMN04488090_1777 | Not Available | Positive | 2270914 - 2271435 | 20030.8 |
| putative heme-binding domain-containing protein | SAMN04488090_1778 | Not Available | Negative | 2271640 - 2274288 | 95322.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
