Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted purr-regulated permease perm | SAMN04488090_1758 | Not Available | Positive | 2248906 - 2249994 | 39985.3 |
| hypothetical protein | SAMN04488090_1759 | Not Available | Negative | 2249991 - 2250614 | 24278.6 |
| gliding motility-associated lipoprotein gldh | SAMN04488090_1760 | Not Available | Negative | 2250633 - 2251085 | 17117.6 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN04488090_1761 | Not Available | Negative | 2251131 - 2252330 | 44503.7 |
| phosphoribosylamine--glycine ligase | SAMN04488090_1762 | Not Available | Negative | 2252403 - 2253680 | 45783.8 |
| atp-dependent dna helicase recq | SAMN04488090_1763 | Not Available | Negative | 2253782 - 2256100 | 87603.7 |
| protein of unknown function | SAMN04488090_1764 | Not Available | Negative | 2256322 - 2256795 | 17292.5 |
| Trna-gly | Not Available | Not Available | Positive | 2257071 - 2257143 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2257186 - 2257270 | Not Available |
| cysteine desulfurase | SAMN04488090_1767 | Not Available | Positive | 2257685 - 2258836 | 42092.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
