Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| demethylmenaquinone methyltransferase | SAMN04488090_1748 | Not Available | Positive | 2237325 - 2238047 | 27071.8 |
| probable protein-translocating porin port | SAMN04488090_1749 | Not Available | Positive | 2238051 - 2238815 | 29455.6 |
| cell division protein ftsz | SAMN04488090_1750 | Not Available | Negative | 2238883 - 2240292 | 51819.2 |
| cell division protein ftsa | SAMN04488090_1751 | Not Available | Negative | 2240380 - 2241897 | 55715.5 |
| cell division protein ftsq | SAMN04488090_1752 | Not Available | Negative | 2242008 - 2242763 | 28983.4 |
| udp-n-acetylmuramate--l-alanine ligase | SAMN04488090_1753 | Not Available | Negative | 2242878 - 2244275 | 51343.1 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN04488090_1754 | Not Available | Negative | 2244328 - 2245458 | 40376.2 |
| cell division protein ftsw | SAMN04488090_1755 | Not Available | Negative | 2245651 - 2246874 | 44995.1 |
| serine o-acetyltransferase | SAMN04488090_1756 | Not Available | Negative | 2247119 - 2247922 | 29569.7 |
| hypothetical protein | SAMN04488090_1757 | Not Available | Negative | 2247968 - 2248861 | 33670.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
