Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | SAMN04488090_1738 | Not Available | Positive | 2221427 - 2224798 | 128035.0 |
| gliding motility-associated lipoprotein gldj/gliding motility-associated lipoprotein gldj,tigr03530 | SAMN04488090_1739 | Not Available | Positive | 2224969 - 2226213 | 46259.0 |
| hypothetical protein | SAMN04488090_1740 | Not Available | Negative | 2226147 - 2226473 | 12654.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_1741 | Not Available | Negative | 2226439 - 2227407 | 36420.0 |
| ssu ribosomal protein s7p | SAMN04488090_1742 | Not Available | Negative | 2227984 - 2228451 | 17650.6 |
| ssu ribosomal protein s12p | SAMN04488090_1743 | Not Available | Negative | 2228552 - 2228959 | 14829.3 |
| quinoprotein glucose dehydrogenase | SAMN04488090_1744 | Not Available | Negative | 2229101 - 2231212 | 77080.5 |
| beta-glucosidase | SAMN04488090_1745 | Not Available | Negative | 2231226 - 2234261 | 112412.0 |
| dna mismatch repair protein mutl | SAMN04488090_1746 | Not Available | Positive | 2234504 - 2236453 | 73517.5 |
| hypothetical protein | SAMN04488090_1747 | Not Available | Positive | 2236555 - 2237088 | 19182.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
