Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1718 | Not Available | Negative | 2195829 - 2196413 | 21767.4 |
| hypothetical protein | SAMN04488090_1719 | Not Available | Negative | 2196472 - 2197719 | 44969.7 |
| alpha-l-fucosidase | SAMN04488090_1720 | Not Available | Negative | 2197853 - 2199268 | 53977.0 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04488090_1721 | Not Available | Negative | 2199284 - 2200498 | 44281.3 |
| asparaginase | SAMN04488090_1722 | Not Available | Positive | 2200799 - 2201830 | 36430.8 |
| hexosaminidase | SAMN04488090_1723 | Not Available | Positive | 2202059 - 2203897 | 68568.5 |
| ferric uptake regulator family protein | SAMN04488090_1724 | Not Available | Negative | 2203943 - 2204206 | 9870.93 |
| protein of unknown function | SAMN04488090_1725 | Not Available | Negative | 2204214 - 2204924 | 26059.8 |
| putative holliday junction resolvase | SAMN04488090_1726 | Not Available | Positive | 2205172 - 2205582 | 15220.3 |
| glycogen(starch) synthase | SAMN04488090_1727 | Not Available | Positive | 2205805 - 2207634 | 70852.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
