Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix dna-binding domain-containing protein | SAMN04488090_1698 | Not Available | Positive | 2171003 - 2172073 | 40345.7 |
| cytochrome c peroxidase | SAMN04488090_1699 | Not Available | Negative | 2172070 - 2173023 | 35481.5 |
| hypothetical protein | SAMN04488090_1700 | Not Available | Negative | 2173020 - 2173784 | 27177.4 |
| cytochrome c peroxidase | SAMN04488090_1701 | Not Available | Negative | 2173798 - 2174892 | 41359.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488090_1702 | Not Available | Negative | 2174973 - 2175878 | 34368.2 |
| sugar phosphate isomerase/epimerase | SAMN04488090_1703 | Not Available | Negative | 2175911 - 2176759 | 32271.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488090_1704 | Not Available | Negative | 2176812 - 2177588 | 28336.1 |
| galactose mutarotase | SAMN04488090_1705 | Not Available | Positive | 2177734 - 2178600 | 32102.6 |
| 3-phytase | SAMN04488090_1706 | Not Available | Negative | 2178707 - 2179747 | 37960.9 |
| right handed beta helix region | SAMN04488090_1707 | Not Available | Negative | 2179810 - 2181054 | 44187.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
