Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN04488090_0159 | Not Available | Negative | 202892 - 203590 | 26675.3 |
| histidine kinase | SAMN04488090_0160 | Not Available | Negative | 203590 - 205050 | 54927.6 |
| abc-type multidrug transport system, atpase component | SAMN04488090_0161 | Not Available | Positive | 205243 - 206127 | 32533.1 |
| peptidase family m1 | SAMN04488090_0162 | Not Available | Positive | 206124 - 209543 | 128644.0 |
| hypothetical protein | SAMN04488090_0163 | Not Available | Positive | 209626 - 210057 | 15896.1 |
| hypothetical protein | SAMN04488090_0164 | Not Available | Negative | 210048 - 210785 | 27069.5 |
| putative membrane protein | SAMN04488090_0165 | Not Available | Negative | 210790 - 211797 | 39226.2 |
| methyltransferase domain-containing protein | SAMN04488090_0166 | Not Available | Negative | 211814 - 212335 | 19344.4 |
| glyoxalase-like domain-containing protein | SAMN04488090_0167 | Not Available | Negative | 212449 - 213279 | 30524.6 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN04488090_0168 | Not Available | Positive | 213443 - 216646 | 117580.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
