Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrin-iii c-methyltransferase | SAMN04488090_1667 | Not Available | Negative | 2131317 - 2132099 | 27647.4 |
| sulfite reductase (ferredoxin) | SAMN04488090_1668 | Not Available | Negative | 2132109 - 2134193 | 77831.3 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN04488090_1669 | Not Available | Positive | 2134462 - 2137794 | 121110.0 |
| hypothetical protein | SAMN04488090_1671 | Not Available | Positive | 2138676 - 2139335 | 24116.5 |
| hypothetical protein | SAMN04488090_1672 | Not Available | Positive | 2139353 - 2141020 | 62749.3 |
| uncharacterized membrane protein yckc, rdd family | SAMN04488090_1673 | Not Available | Negative | 2141017 - 2141742 | 27065.3 |
| uncharacterized membrane protein spoiim, required for sporulation | SAMN04488090_1674 | Not Available | Positive | 2141895 - 2142833 | 35817.6 |
| hypothetical protein | SAMN04488090_1675 | Not Available | Positive | 2142861 - 2143730 | 31992.3 |
| protein of unknown function | SAMN04488090_1676 | Not Available | Positive | 2143732 - 2144454 | 28218.0 |
| protein of unknown function | SAMN04488090_1677 | Not Available | Positive | 2144451 - 2145707 | 48669.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
